Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | SPO_RS13855 | Not Available | Negative | 2918340 - 2918576 | 8241.73 |
| is5 family transposase | SPO_RS22590 | Not Available | Positive | 2918639 - 2919397 | 28768.7 |
| is5 family transposase | SPO_RS13870 | Not Available | Positive | 2919419 - 2920045 | 22880.2 |
| hypothetical protein | SPO_RS13875 | Not Available | Positive | 2920042 - 2920482 | 16035.4 |
| class i sam-dependent dna methyltransferase | SPO_RS13880 | Q57596 | Positive | 2920540 - 2923242 | 101706.0 |
| type i restriction-modification system subunit s | SPO_RS13885 | Not Available | Positive | 2923235 - 2924539 | 48276.4 |
| type i restriction endonuclease subunit r | SPO_RS13890 | Q60295 | Positive | 2924536 - 2927919 | 125160.0 |
| sprt family zinc-dependent metalloprotease | SPO_RS13895 | Not Available | Positive | 2927916 - 2928629 | 27382.1 |
| giy-yig nuclease family protein | SPO_RS13900 | Not Available | Positive | 2928707 - 2929645 | 34297.4 |
| Trna-ser | Not Available | Not Available | Positive | 2929928 - 2930017 | Not Available |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
