Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | SPO_RS01260 | Q5LX42 | Negative | 267660 - 269588 | 68153.2 |
| polyprenyl synthetase family protein | SPO_RS01265 | B1XJV9 | Negative | 269616 - 270482 | 30555.4 |
| exodeoxyribonuclease vii small subunit | SPO_RS01270 | Q5LX40 | Negative | 270485 - 270727 | 8766.4 |
| histone deacetylase family protein | SPO_RS01275 | O30107 | Negative | 270724 - 271650 | 32976.1 |
| response regulator | SPO_RS01280 | P31079 | Negative | 271676 - 272377 | 26379.1 |
| marr family winged helix-turn-helix transcriptional regulator | SPO_RS01285 | P31078 | Negative | 272374 - 272886 | 18934.8 |
| branched-chain amino acid aminotransferase | SPO_RS01290 | Q4ULR3 | Positive | 273044 - 273910 | 31947.1 |
| organic hydroperoxide resistance protein | SPO_RS01295 | P0A0V4 | Negative | 273966 - 274394 | 14327.0 |
| marr family winged helix-turn-helix transcriptional regulator | SPO_RS01300 | O34777 | Positive | 274505 - 274942 | 16218.7 |
| cupredoxin family copper-binding protein | SPO_RS01305 | P22365 | Negative | 274955 - 275236 | 10139.8 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
