Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | SPO_RS13500 | P0AAG4 | Positive | 2815657 - 2816385 | 26899.6 |
| aspartate/glutamate racemase family protein | SPO_RS13505 | O93779 | Negative | 2816517 - 2817974 | 51390.7 |
| aspartate ammonia-lyase | SPO_RS13510 | Q9HTD7 | Negative | 2817971 - 2819341 | 48127.1 |
| amino acid abc transporter atp-binding protein | SPO_RS13515 | O34677 | Negative | 2819352 - 2820110 | 28005.1 |
| amino acid abc transporter permease | SPO_RS13520 | Not Available | Negative | 2820121 - 2820981 | 32669.4 |
| amino acid abc transporter permease | SPO_RS13525 | Not Available | Negative | 2820992 - 2821747 | 28289.7 |
| transporter substrate-binding domain-containing protein | SPO_RS13530 | Not Available | Negative | 2821813 - 2822646 | 30414.1 |
| lysr substrate-binding domain-containing protein | SPO_RS13535 | Not Available | Positive | 2822835 - 2823731 | 33293.9 |
| isopenicillin n synthase family oxygenase | SPO_RS13540 | C8VK14 | Positive | 2823917 - 2824870 | 34431.7 |
| alanine racemase | SPO_RS13545 | Q1GFQ4 | Positive | 2824902 - 2826023 | 40079.1 |
Pathways
1052 pathways
Health Effects
No health effects information available for this bacterium.
