Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | SPO_RS13250 | Not Available | Negative | 2766941 - 2767435 | 17811.1 |
| endopeptidase la | SPO_RS13255 | O69177 | Negative | 2767580 - 2769991 | 88259.9 |
| hypothetical protein | SPO_RS13260 | Not Available | Negative | 2770254 - 2770811 | 20145.4 |
| alkene reductase | SPO_RS13265 | P77258 | Negative | 2770953 - 2772029 | 38541.0 |
| trna guanosine(34) transglycosylase tgt | SPO_RS13270 | Q5LQ80 | Negative | 2772303 - 2773433 | 41643.1 |
| spfh domain-containing protein | SPO_RS13275 | P0DKS0 | Positive | 2773609 - 2774499 | 32314.9 |
| nfed family protein | SPO_RS13280 | Not Available | Positive | 2774499 - 2774771 | 9643.24 |
| suf system fe-s cluster assembly protein | SPO_RS13285 | P70949 | Positive | 2774916 - 2775278 | 13124.8 |
| iron-sulfur cluster assembly accessory protein | SPO_RS13290 | Q9ZD62 | Positive | 2775582 - 2775944 | 12994.7 |
| triose-phosphate isomerase | SPO_RS13295 | Q5LQ75 | Positive | 2776046 - 2776801 | 25458.4 |
Pathways
1052 pathways
Health Effects
No health effects information available for this bacterium.
