Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate import atp-binding protein ugpc | SPO_RS01210 | Q5LX21 | Negative | 255969 - 257024 | 38142.1 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | SPO_RS01215 | Q8YCB0 | Negative | 257035 - 257886 | 31947.3 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | SPO_RS01220 | Q92WD8 | Negative | 257886 - 258767 | 32622.3 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | SPO_RS01225 | P0AG81 | Negative | 258851 - 260152 | 47343.4 |
| lysr substrate-binding domain-containing protein | SPO_RS01230 | P0DV33 | Positive | 260302 - 261231 | 34276.1 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 261903 - 263365 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 263580 - 263656 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 263730 - 263805 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 264254 - 267149 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 267355 - 267469 | Not Available |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
