Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class d beta-lactamase | SPO_RS13150 | B3U538 | Negative | 2747791 - 2748579 | 29119.8 |
| hypothetical protein | SPO_RS13155 | Not Available | Positive | 2748810 - 2749070 | 9781.04 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | SPO_RS13160 | Q5LQ99 | Negative | 2749078 - 2750205 | 39806.9 |
| helix-turn-helix domain-containing protein | SPO_RS13165 | Not Available | Negative | 2750275 - 2751480 | 43130.4 |
| 5-aminolevulinate synthase | SPO_RS13170 | P18079 | Negative | 2751610 - 2752833 | 44084.9 |
| m20/m25/m40 family metallo-hydrolase | SPO_RS13175 | Q5AKA5 | Positive | 2753153 - 2754541 | 50523.4 |
| glycosyltransferase family 2 protein | SPO_RS13180 | Not Available | Negative | 2754570 - 2755457 | 34129.7 |
| Trna-asp | Not Available | Not Available | Positive | 2755572 - 2755648 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2755701 - 2755777 | Not Available |
| pirin family protein | SPO_RS13195 | P58114 | Negative | 2755964 - 2756902 | 34012.4 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
