Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2189 domain-containing protein | SPO_RS13100 | Not Available | Negative | 2734306 - 2735085 | 28509.1 |
| amidase | SPO_RS13105 | O28325 | Negative | 2735117 - 2736520 | 49333.0 |
| voc family protein | SPO_RS13110 | Not Available | Positive | 2736655 - 2737086 | 15212.2 |
| peptide chain release factor 2 | SPO_RS13115 | Q165J6 | Negative | 2737182 - 2738309 | 41670.6 |
| hint domain-containing protein | SPO_RS13120 | Not Available | Positive | 2738541 - 2740532 | 67069.5 |
| penicillin-binding protein 1a | SPO_RS13125 | Q1RKC5 | Negative | 2740526 - 2743012 | 91559.9 |
| n-acetylmuramoyl-l-alanine amidase | SPO_RS13130 | Q9K0V3 | Negative | 2743169 - 2744386 | 43834.4 |
| pyridoxal phosphate-dependent aminotransferase | SPO_RS13135 | P96847 | Negative | 2744448 - 2745593 | 40882.8 |
| m48 family metalloprotease | SPO_RS13140 | Not Available | Positive | 2745616 - 2746965 | 48976.7 |
| dsba family protein | SPO_RS13145 | Not Available | Positive | 2746962 - 2747720 | 27781.2 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
