Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | SPO_RS12915 | Not Available | Negative | 2696371 - 2696883 | 19108.1 |
| trap transporter large permease | SPO_RS12920 | Not Available | Negative | 2696885 - 2698171 | 44828.1 |
| nadph:quinone oxidoreductase family protein | SPO_RS12925 | A7RK30 | Positive | 2698322 - 2699311 | 34577.0 |
| phosphotransferase | SPO_RS12930 | Q6JQN1 | Positive | 2699321 - 2700349 | 37817.2 |
| fadr/gntr family transcriptional regulator | SPO_RS12935 | Not Available | Negative | 2700406 - 2701170 | 28591.4 |
| abc transporter atp-binding protein | SPO_RS12940 | P42065 | Negative | 2701139 - 2702098 | 34712.1 |
| dipeptide/oligopeptide/nickel abc transporter permease/atp-binding protein | SPO_RS12945 | Not Available | Negative | 2702095 - 2703960 | 65990.4 |
| abc transporter permease | SPO_RS12950 | Q8VQK4 | Negative | 2703957 - 2704904 | 34060.2 |
| abc transporter substrate-binding protein | SPO_RS12955 | Not Available | Negative | 2704965 - 2706542 | 56879.8 |
| duf1028 domain-containing protein | SPO_RS12960 | Not Available | Positive | 2706644 - 2707309 | 23170.2 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
