Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter small permeaseSPO_RS12915Not AvailableNegative2696371 - 269688319108.1
trap transporter large permeaseSPO_RS12920Not AvailableNegative2696885 - 269817144828.1
nadph:quinone oxidoreductase family proteinSPO_RS12925A7RK30Positive2698322 - 269931134577.0
phosphotransferaseSPO_RS12930Q6JQN1Positive2699321 - 270034937817.2
fadr/gntr family transcriptional regulatorSPO_RS12935Not AvailableNegative2700406 - 270117028591.4
abc transporter atp-binding proteinSPO_RS12940P42065Negative2701139 - 270209834712.1
dipeptide/oligopeptide/nickel abc transporter permease/atp-binding proteinSPO_RS12945Not AvailableNegative2702095 - 270396065990.4
abc transporter permeaseSPO_RS12950Q8VQK4Negative2703957 - 270490434060.2
abc transporter substrate-binding proteinSPO_RS12955Not AvailableNegative2704965 - 270654256879.8
duf1028 domain-containing proteinSPO_RS12960Not AvailablePositive2706644 - 270730923170.2

Displaying genes 2621 – 2630 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.