Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | SPO_RS22575 | Not Available | Positive | 2672660 - 2673087 | 15341.7 |
| is5 family transposase | SPO_RS12820 | Not Available | Negative | 2673287 - 2674317 | 36846.7 |
| amidase | SPO_RS12825 | P13398 | Negative | 2675133 - 2676572 | 49726.4 |
| amp-binding protein | SPO_RS12830 | Q0P4F7 | Negative | 2676618 - 2678333 | 62184.8 |
| amidohydrolase | SPO_RS12835 | A0A1I9LN01 | Negative | 2678337 - 2680001 | 60119.4 |
| branched-chain amino acid abc transporter permease | SPO_RS12840 | Not Available | Negative | 2679998 - 2681002 | 35889.1 |
| branched-chain amino acid abc transporter permease | SPO_RS12845 | Not Available | Negative | 2681017 - 2681895 | 30693.2 |
| abc transporter atp-binding protein | SPO_RS12850 | P0A192 | Negative | 2681899 - 2682615 | 25886.6 |
| abc transporter atp-binding protein | SPO_RS12855 | Q58663 | Negative | 2682612 - 2683379 | 27156.1 |
| abc transporter substrate-binding protein | SPO_RS12860 | Not Available | Negative | 2683387 - 2684706 | 46853.4 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
