Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SPO_RS12575 | Not Available | Positive | 2627221 - 2627538 | 11121.2 |
| fur family transcriptional regulator | SPO_RS12580 | O07315 | Negative | 2627653 - 2628066 | 15670.7 |
| dead/deah box helicase | SPO_RS12585 | P25888 | Positive | 2628406 - 2629668 | 44914.8 |
| cupin domain-containing protein | SPO_RS12590 | Not Available | Negative | 2629707 - 2630126 | 15508.2 |
| ydiu family protein | SPO_RS12595 | Q5LQK9 | Positive | 2630191 - 2631609 | 51490.1 |
| dmt family transporter | SPO_RS12600 | Not Available | Negative | 2631697 - 2632572 | 30823.5 |
| endonuclease/exonuclease/phosphatase family protein | SPO_RS12605 | Not Available | Positive | 2632673 - 2633389 | 26158.9 |
| anhydro-n-acetylmuramic acid kinase | SPO_RS12610 | Q5LQK6 | Negative | 2633487 - 2634599 | 38187.7 |
| tyrosine--trna ligase | SPO_RS12615 | Q5LQK5 | Positive | 2634662 - 2635909 | 45576.7 |
| hypothetical protein | SPO_RS23435 | Not Available | Negative | 2636008 - 2636130 | 4434.88 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
