Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | SPO_RS12475 | Not Available | Positive | 2610038 - 2611276 | 44552.5 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | SPO_RS12480 | Q1GI38 | Positive | 2611281 - 2612240 | 33116.0 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | SPO_RS12485 | Q5LQN0 | Positive | 2612322 - 2613161 | 30315.1 |
| duf4167 domain-containing protein | SPO_RS12490 | Not Available | Negative | 2613329 - 2613964 | 23301.5 |
| peptide chain release factor n(5)-glutamine methyltransferase | SPO_RS12495 | Q3J2B7 | Negative | 2614197 - 2615039 | 29785.7 |
| peptide chain release factor 1 | SPO_RS12500 | Q5LQM7 | Negative | 2615036 - 2616091 | 38864.2 |
| hypothetical protein | SPO_RS12505 | Not Available | Positive | 2616155 - 2616448 | 10673.3 |
| duf1499 domain-containing protein | SPO_RS12510 | Not Available | Negative | 2616389 - 2616787 | 14651.8 |
| agmatinase | SPO_RS12515 | Q9I3S3 | Negative | 2616797 - 2617744 | 34125.6 |
| winged helix-turn-helix transcriptional regulator | SPO_RS12520 | Not Available | Negative | 2617829 - 2618368 | 19215.3 |
Pathways
1052 pathways
Health Effects
No health effects information available for this bacterium.
