Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | SPO_RS12375 | Q8GAI3 | Negative | 2587543 - 2589981 | 88209.0 |
| asp/glu racemase | SPO_RS12380 | Not Available | Negative | 2590021 - 2590803 | 27413.8 |
| phytanoyl-coa dioxygenase family protein | SPO_RS12385 | R9UTQ8 | Negative | 2590806 - 2591693 | 32394.1 |
| gntr family transcriptional regulator | SPO_RS12390 | Not Available | Positive | 2591934 - 2592701 | 28314.4 |
| xaa-pro peptidase family protein | SPO_RS12395 | Not Available | Positive | 2592694 - 2593863 | 42230.6 |
| abc transporter substrate-binding protein | SPO_RS12400 | Not Available | Positive | 2594125 - 2595051 | 33100.8 |
| proline/glycine betaine abc transporter permease | SPO_RS12405 | E0SCY2 | Positive | 2595165 - 2596196 | 37510.1 |
| glycine betaine/l-proline abc transporter atp-binding protein | SPO_RS12410 | Q9KIF7 | Positive | 2596208 - 2597269 | 39467.7 |
| nucleoside-diphosphate kinase | SPO_RS12415 | Q5LQP4 | Negative | 2597381 - 2597803 | 15175.0 |
| bcr/cfla family efflux mfs transporter | SPO_RS12420 | P32482 | Negative | 2597930 - 2599129 | 41891.2 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
