Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | SPO_RS12325 | Q9KKU0 | Negative | 2576698 - 2577585 | 31715.4 |
| sdr family oxidoreductase | SPO_RS12330 | Q8P3K4 | Negative | 2577593 - 2578315 | 25049.0 |
| nad(p)-dependent oxidoreductase | SPO_RS12335 | Q949M8 | Negative | 2578312 - 2579205 | 31211.6 |
| gfo/idh/moca family protein | SPO_RS12340 | Not Available | Negative | 2579217 - 2580233 | 35827.8 |
| uxaa family hydrolase | SPO_RS12345 | P42240 | Negative | 2580278 - 2581771 | 52537.8 |
| trap transporter large permease subunit | SPO_RS12350 | Not Available | Negative | 2581862 - 2583490 | 58137.2 |
| trap transporter small permease subunit | SPO_RS12355 | Not Available | Negative | 2583492 - 2584298 | 30544.8 |
| trap transporter substrate-binding protein | SPO_RS12360 | P37735 | Negative | 2584429 - 2585442 | 36683.9 |
| gntr family transcriptional regulator | SPO_RS12365 | P54988 | Positive | 2585668 - 2586345 | 25865.2 |
| fumarylacetoacetate hydrolase family protein | SPO_RS12370 | B1Z1Y2 | Positive | 2586388 - 2587233 | 29531.3 |
Pathways
1052 pathways
Health Effects
No health effects information available for this bacterium.
