Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopropylmalate isomerase | SPO_RS01105 | Not Available | Negative | 237948 - 238046 | 3715.49 |
| mechanosensitive ion channel family protein | SPO_RS01110 | Q57362 | Positive | 238133 - 239485 | 49414.9 |
| ribosome silencing factor | SPO_RS01115 | Q5NLX3 | Positive | 239649 - 240011 | 13545.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | SPO_RS01120 | Q5LX20 | Positive | 240058 - 240528 | 16865.5 |
| flavodoxin family protein | SPO_RS01125 | Not Available | Positive | 240537 - 241022 | 17097.7 |
| alanine dehydrogenase | SPO_RS01130 | E1V931 | Negative | 241109 - 242224 | 38517.6 |
| lrp/asnc family transcriptional regulator | SPO_RS01135 | Not Available | Positive | 242364 - 242822 | 16840.4 |
| polyphosphate kinase 2 | SPO_RS01140 | Q5LX16 | Positive | 242986 - 243903 | 36712.9 |
| marr family winged helix-turn-helix transcriptional regulator | SPO_RS01145 | Not Available | Negative | 243987 - 244499 | 18901.5 |
| cytochrome p450 | SPO_RS01150 | P24467 | Positive | 244608 - 245786 | 42779.2 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
