Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | SPO_RS11970 | Not Available | Positive | 2500329 - 2501936 | 58950.0 |
| is5 family transposase | SPO_RS11975 | Q92UW6 | Positive | 2501988 - 2503215 | 44858.7 |
| hamp domain-containing sensor histidine kinase | SPO_RS11980 | P39453 | Negative | 2503500 - 2505668 | 78173.2 |
| amino acid abc transporter substrate-binding protein | SPO_RS11985 | Q52812 | Negative | 2505665 - 2506663 | 35992.4 |
| phosphoserine phosphatase serb | SPO_RS11990 | O28142 | Negative | 2506663 - 2507556 | 30995.9 |
| amino acid abc transporter substrate-binding protein | SPO_RS11995 | Q52663 | Positive | 2507886 - 2508899 | 35386.7 |
| amino acid abc transporter permease | SPO_RS12000 | P45767 | Positive | 2509044 - 2510138 | 38841.3 |
| amino acid abc transporter permease | SPO_RS12005 | Q52814 | Positive | 2510143 - 2511243 | 39510.9 |
| amino acid abc transporter atp-binding protein | SPO_RS12010 | Q52815 | Positive | 2511263 - 2512033 | 28805.8 |
| na/pi cotransporter family protein | SPO_RS12015 | P0AF43 | Positive | 2512085 - 2513692 | 57141.1 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
