Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | SPO_RS01055 | Q9DBT9 | Negative | 225805 - 228222 | 88611.3 |
| Trna-pro | Not Available | Not Available | Positive | 228692 - 228768 | Not Available |
| na/pi cotransporter family protein | SPO_RS01065 | P54463 | Positive | 228897 - 230498 | 56063.6 |
| 3-isopropylmalate dehydrogenase | SPO_RS01070 | Q5LWZ5 | Negative | 230495 - 231598 | 39483.5 |
| lysr family transcriptional regulator | SPO_RS01075 | Not Available | Negative | 231701 - 232597 | 32377.3 |
| sugar nucleotide-binding protein | SPO_RS01080 | Not Available | Positive | 232689 - 233597 | 32940.5 |
| endonuclease/exonuclease/phosphatase family protein | SPO_RS01085 | Not Available | Negative | 233547 - 234620 | 37915.8 |
| hypothetical protein | SPO_RS01090 | Not Available | Negative | 234617 - 235450 | 30575.4 |
| 3-isopropylmalate dehydratase small subunit | SPO_RS01095 | Q5LX07 | Negative | 235799 - 236404 | 22321.8 |
| 3-isopropylmalate dehydratase large subunit | SPO_RS01100 | Q5LX06 | Negative | 236489 - 237895 | 50365.2 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
