Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | SPO_RS11575 | Q5LR48 | Positive | 2421109 - 2421711 | 21173.7 |
| lytic transglycosylase domain-containing protein | SPO_RS11580 | Not Available | Positive | 2421894 - 2422367 | 17615.1 |
| helix-turn-helix domain-containing protein | SPO_RS11585 | P55360 | Positive | 2422761 - 2423165 | 14689.6 |
| luxr family transcriptional regulator | SPO_RS11590 | O54452 | Positive | 2423205 - 2423906 | 26047.1 |
| acyl-homoserine-lactone synthase | SPO_RS11595 | P33904 | Positive | 2424069 - 2424872 | 29419.9 |
| trigger factor | SPO_RS11600 | Q5LR43 | Negative | 2424964 - 2426295 | 48941.7 |
| porin | SPO_RS11605 | Not Available | Negative | 2426486 - 2427619 | 40678.5 |
| porin | SPO_RS11610 | Not Available | Negative | 2427935 - 2429041 | 39309.4 |
| Trna-leu | Not Available | Not Available | Positive | 2429427 - 2429510 | Not Available |
| hint domain-containing protein | SPO_RS11620 | Not Available | Positive | 2429721 - 2430230 | 17851.7 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
