Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsre family protein | SPO_RS11175 | Not Available | Negative | 2343232 - 2343690 | 16371.0 |
| l,d-transpeptidase | SPO_RS11180 | P05448 | Positive | 2343924 - 2344523 | 22111.3 |
| hypothetical protein | SPO_RS11185 | Not Available | Negative | 2344520 - 2344990 | 16785.0 |
| hypothetical protein | SPO_RS11190 | Not Available | Negative | 2345031 - 2345474 | 15226.2 |
| class i sam-dependent methyltransferase | SPO_RS11195 | Not Available | Negative | 2345606 - 2346451 | 31641.5 |
| carboxylate-amine ligase | SPO_RS11200 | Q5LRC0 | Positive | 2346584 - 2347699 | 42186.7 |
| sialidase family protein | SPO_RS11205 | Not Available | Negative | 2347763 - 2349913 | 79121.1 |
| acyl-coa dehydrogenase family protein | SPO_RS11210 | Q54IM8 | Positive | 2350325 - 2351467 | 41173.2 |
| enoyl-coa hydratase/isomerase family protein | SPO_RS11215 | Q28FR6 | Positive | 2351475 - 2352521 | 37760.3 |
| 3-hydroxyisobutyrate dehydrogenase | SPO_RS11220 | P63936 | Positive | 2352518 - 2353390 | 29232.2 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
