Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formimidoylglutamate deiminase | SPO_RS11125 | Q9HU77 | Positive | 2333248 - 2334609 | 48475.6 |
| amidohydrolase | SPO_RS11130 | P45493 | Positive | 2334737 - 2335879 | 40391.2 |
| diaminopropionate ammonia-lyase | SPO_RS11135 | P66901 | Positive | 2335882 - 2337075 | 41555.4 |
| duf808 domain-containing protein | SPO_RS11140 | P46125 | Negative | 2337094 - 2338074 | 33945.1 |
| type i glyceraldehyde-3-phosphate dehydrogenase | SPO_RS11145 | P29272 | Positive | 2338258 - 2339259 | 35566.6 |
| hypothetical protein | SPO_RS23205 | Not Available | Positive | 2339335 - 2339478 | 5562.09 |
| pantetheine-phosphate adenylyltransferase | SPO_RS11155 | Q5LRC9 | Negative | 2339578 - 2340075 | 18049.1 |
| cbs domain-containing protein | SPO_RS11160 | Q9LEV3 | Negative | 2340169 - 2340603 | 15086.4 |
| lysr family transcriptional regulator | SPO_RS11165 | Not Available | Negative | 2340664 - 2341566 | 33120.6 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | SPO_RS11170 | Q9I702 | Positive | 2341672 - 2343171 | 53694.5 |
Pathways
1052 pathways
Health Effects
No health effects information available for this bacterium.
