Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | SPO_RS11075 | Not Available | Negative | 2321561 - 2321998 | 15178.1 |
| trap transporter permease | SPO_RS11080 | Not Available | Negative | 2321995 - 2324604 | 92260.0 |
| taxi family trap transporter solute-binding subunit | SPO_RS11085 | Not Available | Negative | 2324728 - 2325696 | 34340.2 |
| gnat family n-acetyltransferase | SPO_RS11090 | Not Available | Negative | 2325954 - 2326373 | 15351.2 |
| lrp/asnc family transcriptional regulator | SPO_RS11095 | P55658 | Negative | 2326567 - 2327031 | 17893.7 |
| utra domain-containing protein | SPO_RS11100 | Q9HU78 | Negative | 2327116 - 2327817 | 26154.2 |
| imidazolonepropionase | SPO_RS11105 | Q5LRD9 | Positive | 2327999 - 2329204 | 42291.0 |
| histidine ammonia-lyase | SPO_RS11110 | Q5LRD8 | Positive | 2329237 - 2330739 | 52528.8 |
| n-formylglutamate deformylase | SPO_RS11115 | Q9HU92 | Positive | 2330736 - 2331551 | 29554.8 |
| urocanate hydratase | SPO_RS11120 | Q8U8Z9 | Positive | 2331554 - 2333236 | 60962.4 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
