Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comec/rec2 family competence protein | SPO_RS10925 | P39695 | Negative | 2290062 - 2292092 | 71218.3 |
| glutamate--trna ligase | SPO_RS10930 | Q5LRH2 | Positive | 2292174 - 2293580 | 51397.0 |
| citrate synthase | SPO_RS10935 | O33915 | Positive | 2293704 - 2294999 | 48096.3 |
| hypothetical protein | SPO_RS22210 | Not Available | Positive | 2295314 - 2296495 | 41662.1 |
| pa0069 family radical sam protein | SPO_RS10945 | Not Available | Negative | 2296509 - 2297597 | 40141.6 |
| cobalamin-binding protein | SPO_RS10950 | Q8TTB0 | Positive | 2297865 - 2298563 | 25235.6 |
| hint domain-containing protein | SPO_RS10955 | Not Available | Positive | 2298741 - 2299781 | 36893.3 |
| duf1638 domain-containing protein | SPO_RS10960 | Not Available | Positive | 2299873 - 2300529 | 24405.2 |
| glutathione s-transferase family protein | SPO_RS10965 | Not Available | Negative | 2300556 - 2301185 | 22234.6 |
| yafy family protein | SPO_RS10970 | Not Available | Positive | 2301279 - 2301989 | 26935.7 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
