Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | SPO_RS10775 | Not Available | Negative | 2258352 - 2258849 | 17803.2 |
| alpha/beta hydrolase | SPO_RS10780 | Q4I8Q4 | Negative | 2258846 - 2259511 | 23588.3 |
| dna-3-methyladenine glycosylase | SPO_RS10785 | Not Available | Negative | 2259508 - 2260140 | 23141.1 |
| mfs transporter | SPO_RS10790 | A6X7E7 | Positive | 2260244 - 2261461 | 41834.8 |
| squalene/phytoene synthase family protein | SPO_RS10795 | Not Available | Negative | 2261592 - 2262374 | 28477.3 |
| citramalate synthase | SPO_RS10800 | O66682 | Negative | 2262371 - 2264005 | 58528.4 |
| cysteine--trna ligase | SPO_RS10805 | Q5LRJ6 | Negative | 2264121 - 2265518 | 52234.1 |
| pyridoxal phosphate-dependent aminotransferase | SPO_RS10810 | Q9HUI9 | Positive | 2265776 - 2266963 | 41991.1 |
| outer membrane beta-barrel protein | SPO_RS10815 | Not Available | Negative | 2267007 - 2267525 | 17770.0 |
| trimethylamine methyltransferase family protein | SPO_RS10820 | Not Available | Positive | 2267946 - 2269490 | 55009.1 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
