Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | SPO_RS00955 | Q9HV32 | Positive | 204208 - 204873 | 24903.1 |
| sensor histidine kinase | SPO_RS00960 | P45336 | Positive | 204870 - 206255 | 50333.6 |
| abc transporter substrate-binding protein | SPO_RS00965 | Not Available | Positive | 206225 - 207250 | 37798.0 |
| gmc family oxidoreductase | SPO_RS00970 | Not Available | Positive | 207330 - 208943 | 58055.4 |
| flagellar motor protein motb | SPO_RS00975 | P0AF07 | Positive | 209027 - 209863 | 30147.0 |
| flagellar hook protein flge | SPO_RS00980 | Q8FUS9 | Positive | 209965 - 211260 | 45399.0 |
| flagellar hook-associated protein flgk | SPO_RS00985 | Not Available | Positive | 211299 - 212750 | 50275.5 |
| flagellin | SPO_RS00990 | Not Available | Positive | 212793 - 213761 | 33936.0 |
| flagellar basal body p-ring protein flgi | SPO_RS00995 | Q5LWZ2 | Positive | 213758 - 214858 | 38187.1 |
| flagellar type iii secretion system pore protein flip | SPO_RS01000 | Q45980 | Negative | 215016 - 215708 | 24500.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
