Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | SPO_RS10575 | Q04849 | Negative | 2221243 - 2222655 | 52219.8 |
| pas domain-containing sensor histidine kinase | SPO_RS10580 | Q04850 | Negative | 2222652 - 2224937 | 84260.9 |
| sigma-54 dependent transcriptional regulator | SPO_RS10585 | P09432 | Negative | 2225037 - 2226410 | 50459.1 |
| nitrogen regulation protein nr(ii) | SPO_RS10590 | P09431 | Negative | 2226410 - 2227489 | 38709.5 |
| trna dihydrouridine synthase dusb | SPO_RS10595 | Q08111 | Negative | 2227486 - 2228469 | 35158.6 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SPO_RS10600 | Q5LRN5 | Positive | 2228664 - 2229797 | 39704.4 |
| phosphatidylglycerophosphatase a | SPO_RS10605 | P44157 | Positive | 2229794 - 2230291 | 17163.1 |
| cina family protein | SPO_RS10610 | P0A6G4 | Positive | 2230288 - 2230767 | 16189.3 |
| ammonium transporter | SPO_RS10615 | O26757 | Positive | 2230922 - 2232103 | 40869.6 |
| gnat family n-acetyltransferase | SPO_RS10620 | Not Available | Negative | 2232171 - 2232683 | 19043.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
