Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyrate dehydrogenase | SPO_RS10475 | Not Available | Negative | 2196491 - 2197264 | 26924.4 |
| extracellular solute-binding protein | SPO_RS10480 | Q8YC41 | Positive | 2197776 - 2199488 | 63645.1 |
| hypothetical protein | SPO_RS10485 | Not Available | Positive | 2199637 - 2199861 | 8867.34 |
| helix-turn-helix domain-containing protein | SPO_RS10490 | Not Available | Negative | 2199865 - 2200488 | 23081.4 |
| class i adenylate-forming enzyme family protein | SPO_RS10495 | Q9AJS8 | Positive | 2200553 - 2202070 | 53465.4 |
| dsba family oxidoreductase | SPO_RS10500 | Not Available | Positive | 2202067 - 2202723 | 24079.6 |
| multidrug effflux mfs transporter | SPO_RS10505 | P28246 | Positive | 2202802 - 2204010 | 42530.7 |
| tetratricopeptide repeat protein | SPO_RS10510 | Not Available | Positive | 2204068 - 2205735 | 62008.4 |
| sh3 domain-containing protein | SPO_RS10515 | Not Available | Positive | 2205738 - 2206391 | 23596.1 |
| transcription-repair coupling factor | SPO_RS10520 | Q1RI82 | Negative | 2206461 - 2209913 | 127083.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
