Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSPO_RS10325Not AvailablePositive2162982 - 216357522740.4
atp-binding proteinSPO_RS10330P0DOA0Negative2163582 - 216581680572.0
rsmb/nop family class i sam-dependent rna methyltransferaseSPO_RS10335Q9I7A9Negative2165994 - 216716940834.6
mbl fold metallo-hydrolaseSPO_RS10340Not AvailableNegative2167173 - 216795827580.8
imp dehydrogenaseSPO_RS10345Q9KH33Negative2167958 - 216940650759.1
caib/baif coa-transferase family proteinSPO_RS10350A9X6P9Positive2169591 - 217074841152.4
askha domain-containing proteinSPO_RS10355P0DX10Positive2170879 - 217291872578.1
class i sam-dependent methyltransferaseSPO_RS10360A0A1X9WEP1Positive2172940 - 217379729768.5
Trna-glyNot AvailableNot AvailablePositive2173835 - 2173908Not Available
hypothetical proteinSPO_RS10370Not AvailablePositive2174020 - 217443914537.3

Displaying genes 2121 – 2130 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.