Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase family cysteine hydrolase | SPO_RS09300 | D4GEU5 | Positive | 1947184 - 1947825 | 23414.8 |
| abc transporter atp-binding protein | SPO_RS09305 | P21629 | Positive | 1947818 - 1948543 | 25781.1 |
| abc transporter substrate-binding protein | SPO_RS09310 | P21175 | Positive | 1948575 - 1949729 | 40326.0 |
| abc transporter atp-binding protein | SPO_RS09315 | Not Available | Positive | 1949791 - 1950489 | 24756.2 |
| branched-chain amino acid abc transporter permease | SPO_RS09320 | Not Available | Positive | 1950491 - 1951387 | 31278.6 |
| branched-chain amino acid abc transporter permease | SPO_RS09325 | Not Available | Positive | 1951384 - 1952403 | 36199.6 |
| acetamidase/formamidase family protein | SPO_RS09330 | Q07838 | Positive | 1952413 - 1953351 | 32867.1 |
| abc transporter atp-binding protein | SPO_RS09335 | P54933 | Negative | 1953387 - 1954388 | 35999.5 |
| gfo/idh/moca family protein | SPO_RS09340 | Not Available | Negative | 1954390 - 1955418 | 37137.1 |
| carbohydrate abc transporter permease | SPO_RS09345 | P40980 | Negative | 1955415 - 1956254 | 30989.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
