Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | SPO_RS09105 | Q8RCU0 | Positive | 1906237 - 1906971 | 26062.9 |
| extracellular solute-binding protein | SPO_RS09110 | D4GSY9 | Positive | 1907012 - 1907806 | 27151.9 |
| helix-turn-helix transcriptional regulator | SPO_RS09115 | Not Available | Negative | 1907918 - 1908790 | 30960.2 |
| hypothetical protein | SPO_RS23425 | Not Available | Negative | 1908791 - 1908916 | 4191.18 |
| c-type cytochrome | SPO_RS09120 | P00068 | Negative | 1908913 - 1910181 | 45310.7 |
| formate dehydrogenase subunit gamma | SPO_RS09125 | Not Available | Negative | 1910178 - 1911359 | 42705.2 |
| formate dehydrogenase fdh3 subunit beta | SPO_RS09130 | P27273 | Negative | 1911484 - 1912077 | 21241.3 |
| formate dehydrogenase subunit alpha | SPO_RS09135 | P06131 | Negative | 1912090 - 1914984 | 106178.0 |
| twin-arginine translocation signal domain-containing protein | SPO_RS09140 | Not Available | Negative | 1915091 - 1915282 | 6592.64 |
| molecular chaperone | SPO_RS09145 | Not Available | Negative | 1915350 - 1915961 | 22172.6 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
