Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SPO_RS09005 | Not Available | Positive | 1887632 - 1888204 | 19817.5 |
| trap transporter large permease | SPO_RS09010 | Q9KR66 | Negative | 1888275 - 1889534 | 44499.3 |
| trap transporter small permease | SPO_RS09015 | Not Available | Negative | 1889531 - 1890073 | 19920.7 |
| trap transporter substrate-binding protein | SPO_RS09020 | Q5LSJ5 | Negative | 1890140 - 1891123 | 34907.3 |
| 3-hydroxyanthranilate 3,4-dioxygenase | SPO_RS09025 | Q5LSJ4 | Negative | 1891174 - 1891716 | 20576.5 |
| cupin domain-containing protein | SPO_RS09030 | Not Available | Positive | 1892039 - 1892671 | 22924.8 |
| nad(p)-dependent oxidoreductase | SPO_RS09035 | Q8ZNL8 | Positive | 1892851 - 1894185 | 45804.6 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | SPO_RS09040 | P25889 | Positive | 1894228 - 1895532 | 47234.2 |
| hypothetical protein | SPO_RS09045 | Not Available | Negative | 1895587 - 1895817 | 9057.04 |
| mfs transporter | SPO_RS09050 | Not Available | Positive | 1896004 - 1897215 | 41841.7 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
