Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | SPO_RS08955 | Q9JU97 | Positive | 1881258 - 1882379 | 40446.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | SPO_RS08960 | Q28LT2 | Positive | 1882381 - 1882932 | 19343.1 |
| transcription antitermination factor nusb | SPO_RS08965 | Q0APG4 | Positive | 1882929 - 1883411 | 17785.1 |
| response regulator transcription factor | SPO_RS22185 | Not Available | Negative | 1883584 - 1884360 | 28440.0 |
| hypothetical protein | SPO_RS08975 | Not Available | Positive | 1884457 - 1884762 | 11079.8 |
| mmcb family dna repair protein | SPO_RS08980 | Not Available | Positive | 1885041 - 1885487 | 16745.2 |
| duf6324 family protein | SPO_RS08985 | Not Available | Negative | 1885564 - 1885755 | 6941.22 |
| gnat family n-acetyltransferase | SPO_RS08990 | Not Available | Positive | 1885834 - 1886316 | 18169.6 |
| Trna-his | Not Available | Not Available | Positive | 1886363 - 1886439 | Not Available |
| hypothetical protein | SPO_RS09000 | Not Available | Negative | 1886496 - 1887512 | 38759.2 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
