Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod | SPO_RS08905 | D5AQI9 | Positive | 1870216 - 1872198 | 75282.3 |
| hypothetical protein | SPO_RS08910 | Not Available | Positive | 1872470 - 1872883 | 14811.9 |
| secondary thiamine-phosphate synthase enzyme yjbq | SPO_RS08915 | P74125 | Positive | 1872903 - 1873313 | 15155.2 |
| transcriptional regulator nrdr | SPO_RS08920 | Q5LSL4 | Positive | 1873442 - 1873912 | 18094.7 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | SPO_RS08925 | P25539 | Positive | 1873933 - 1875003 | 37131.8 |
| capsular polysaccharide biosynthesis protein | SPO_RS08930 | P42217 | Negative | 1875207 - 1877210 | 72977.5 |
| polysaccharide biosynthesis/export family protein | SPO_RS08935 | Not Available | Negative | 1877214 - 1878347 | 40230.8 |
| capsule biosynthesis protein | SPO_RS08940 | P42218 | Negative | 1878443 - 1879735 | 49250.2 |
| riboflavin synthase | SPO_RS08945 | Q2YN92 | Positive | 1879907 - 1880494 | 20452.3 |
| hypothetical protein | SPO_RS08950 | Not Available | Positive | 1880498 - 1881070 | 20441.7 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
