Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tade/tadg family type iv pilus assembly protein | SPO_RS08855 | Not Available | Negative | 1857974 - 1858525 | 21130.3 |
| tade/tadg family type iv pilus assembly protein | SPO_RS08860 | Not Available | Negative | 1858530 - 1859063 | 19601.8 |
| tade/tadg family type iv pilus assembly protein | SPO_RS08865 | Not Available | Negative | 1859060 - 1860736 | 61344.5 |
| glu/leu/phe/val dehydrogenase | SPO_RS08870 | Q53199 | Positive | 1861060 - 1862490 | 52755.2 |
| sarcosine oxidase subunit beta family protein | SPO_RS08875 | Not Available | Positive | 1862690 - 1863943 | 45759.7 |
| sarcosine oxidase subunit delta | SPO_RS08880 | O87387 | Positive | 1863999 - 1864262 | 9866.49 |
| sarcosine oxidase subunit alpha family protein | SPO_RS08885 | O87386 | Positive | 1864259 - 1867192 | 105032.0 |
| sarcosine oxidase subunit gamma | SPO_RS08890 | Not Available | Positive | 1867185 - 1867730 | 18437.4 |
| hypothetical protein | SPO_RS08895 | Not Available | Positive | 1867766 - 1868062 | 10948.1 |
| dna primase | SPO_RS08900 | P0A118 | Positive | 1868155 - 1870104 | 71866.0 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
