Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | SPO_RS08445 | Q5LSV4 | Positive | 1770257 - 1771012 | 27131.8 |
| hypothetical protein | SPO_RS08450 | Not Available | Positive | 1771108 - 1771770 | 25303.9 |
| ribosome recycling factor | SPO_RS08455 | Q5LSV2 | Positive | 1771942 - 1772505 | 21018.3 |
| isoprenyl transferase | SPO_RS08460 | Q92Q51 | Positive | 1772516 - 1773247 | 27604.0 |
| phosphatidate cytidylyltransferase | SPO_RS08465 | Q8YHH2 | Positive | 1773244 - 1774026 | 27472.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | SPO_RS08470 | Q5LSU9 | Positive | 1774041 - 1775213 | 41398.7 |
| rip metalloprotease rsep | SPO_RS08475 | Q8UFL7 | Positive | 1775218 - 1776588 | 48207.2 |
| hypothetical protein | SPO_RS23415 | Not Available | Positive | 1776688 - 1776813 | 4500.69 |
| outer membrane protein assembly factor bama | SPO_RS08480 | C6V5K2 | Positive | 1777042 - 1779306 | 83619.4 |
| omph family outer membrane protein | SPO_RS08485 | Not Available | Positive | 1779353 - 1779886 | 19434.3 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
