Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alcohol dehydrogenase family proteinSPO_RS08105Not AvailablePositive1688202 - 168928438106.4
mandelate racemase/muconate lactonizing enzyme family proteinSPO_RS08110Not AvailablePositive1689281 - 169038739787.9
mandelate racemase/muconate lactonizing enzyme family proteinSPO_RS08115D7A0Y2Positive1690384 - 169148738829.1
dimethylsulfonioproprionate lyase dddqSPO_RS22175Q5LT18Positive1691492 - 169209722064.2
aspartate aminotransferase family proteinSPO_RS08125C0ZAH4Positive1692094 - 169336844944.1
maoc family dehydratase n-terminal domain-containing proteinSPO_RS08130A9WC41Negative1693553 - 169438630725.5
mmge/prpd family proteinSPO_RS22180Not AvailableNegative1694412 - 169574946485.8
fumarylacetoacetate hydrolase family proteinSPO_RS08140O06724Negative1695746 - 169659128923.7
ketopantoate reductase family proteinSPO_RS08145Q8YX96Negative1696588 - 169752332388.2
trimethylamine methyltransferase family proteinSPO_RS08150Q18TV3Negative1697520 - 169902852588.1

Displaying genes 1661 – 1670 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.