Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii glutamate--ammonia ligase | SPO_RS08005 | O87393 | Negative | 1665985 - 1667313 | 48779.1 |
| fmn-binding glutamate synthase family protein | SPO_RS08010 | O87392 | Negative | 1667387 - 1668739 | 48090.4 |
| gxgxg domain-containing protein | SPO_RS08015 | O87391 | Negative | 1668747 - 1669424 | 23687.1 |
| glutamine amidotransferase family protein | SPO_RS08020 | O87390 | Negative | 1669425 - 1670354 | 33444.7 |
| hypothetical protein | SPO_RS08025 | Not Available | Negative | 1670499 - 1670717 | 8449.12 |
| ammonium transporter | SPO_RS08030 | Not Available | Negative | 1670730 - 1672103 | 49900.6 |
| aminomethyltransferase family protein | SPO_RS08035 | B8D1D7 | Positive | 1672348 - 1673493 | 41859.0 |
| dimethylamine monooxygenase subunit dmma | SPO_RS08040 | Not Available | Positive | 1673538 - 1674179 | 23113.6 |
| pdr/vanb family oxidoreductase | SPO_RS08045 | D0C9N8 | Positive | 1674176 - 1675162 | 36279.1 |
| dimethylamine monooxygenase subunit dmmc | SPO_RS08050 | Not Available | Positive | 1675174 - 1676241 | 41435.3 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
