Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group ii truncated hemoglobin | SPO_RS07955 | Not Available | Positive | 1653925 - 1654377 | 16882.9 |
| glycerate kinase | SPO_RS07960 | Not Available | Negative | 1654383 - 1655597 | 41830.3 |
| coa ester lyase | SPO_RS07965 | Not Available | Negative | 1655644 - 1656621 | 35465.2 |
| response regulator transcription factor | SPO_RS07970 | P56644 | Negative | 1656750 - 1657364 | 22294.3 |
| aminotransferase class v-fold plp-dependent enzyme | SPO_RS07975 | Q9X1C0 | Positive | 1657593 - 1658840 | 44414.1 |
| malate--coa ligase subunit beta | SPO_RS07980 | Q98KT9 | Positive | 1658882 - 1660081 | 43169.8 |
| succinate--coa ligase subunit alpha | SPO_RS07985 | P53595 | Positive | 1660078 - 1660968 | 30950.5 |
| d-glycerate dehydrogenase | SPO_RS07990 | Q9C4M5 | Positive | 1660986 - 1661960 | 35415.6 |
| phosphoenolpyruvate carboxylase | SPO_RS07995 | Q49136 | Positive | 1661960 - 1664599 | 97073.3 |
| serine hydroxymethyltransferase | SPO_RS08000 | Not Available | Positive | 1664625 - 1665920 | 46164.9 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
