Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter | SPO_RS07910 | Not Available | Negative | 1640346 - 1641719 | 48890.0 |
| hypothetical protein | SPO_RS22830 | Not Available | Negative | 1641781 - 1642167 | 14713.0 |
| nad(p)h-dependent oxidoreductase subunit e | SPO_RS07915 | P56913 | Positive | 1642161 - 1643843 | 60362.3 |
| formate dehydrogenase subunit alpha | SPO_RS07920 | Not Available | Positive | 1643845 - 1646625 | 100231.0 |
| formate--tetrahydrofolate ligase | SPO_RS07925 | Not Available | Positive | 1646654 - 1648330 | 60047.4 |
| chorismate mutase | SPO_RS07930 | Not Available | Positive | 1648390 - 1648695 | 11341.6 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | SPO_RS07935 | Not Available | Positive | 1648759 - 1649649 | 30927.5 |
| bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase | SPO_RS07940 | Q5LT54 | Positive | 1649646 - 1650524 | 30884.9 |
| dmt family transporter | SPO_RS07945 | Not Available | Negative | 1650541 - 1651386 | 28713.3 |
| trimethylamine-oxide aldolase tdm | SPO_RS07950 | A7GSN8 | Positive | 1651510 - 1653879 | 86208.7 |
Pathways
1052 pathways
Health Effects
No health effects information available for this bacterium.
