Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SPO_RS07860 | P77308 | Positive | 1628489 - 1629547 | 38790.2 |
| nickel transporter permease | SPO_RS07865 | Not Available | Positive | 1629544 - 1630458 | 32744.7 |
| abc transporter atp-binding protein | SPO_RS07870 | P24136 | Positive | 1630455 - 1631309 | 31692.0 |
| abc transporter atp-binding protein | SPO_RS07875 | P18766 | Positive | 1631306 - 1632070 | 27818.4 |
| abc transporter substrate-binding protein | SPO_RS07880 | Not Available | Positive | 1632444 - 1633385 | 34223.0 |
| glycine betaine/l-proline abc transporter atp-binding protein | SPO_RS07885 | P46920 | Positive | 1633469 - 1634482 | 37119.0 |
| proline/glycine betaine abc transporter permease | SPO_RS07890 | P46921 | Positive | 1634482 - 1636458 | 71335.0 |
| nad(p)-binding domain-containing protein | SPO_RS07895 | Q9FWW9 | Negative | 1636629 - 1637981 | 51707.4 |
| abc transporter substrate-binding protein | SPO_RS07900 | Not Available | Positive | 1638147 - 1639448 | 48423.2 |
| fadr/gntr family transcriptional regulator | SPO_RS07905 | P0ACL7 | Negative | 1639493 - 1640212 | 27184.5 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
