Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | SPO_RS00655 | P94681 | Positive | 135177 - 135923 | 26297.6 |
| p1 family peptidase | SPO_RS00660 | P9WM22 | Positive | 135951 - 136958 | 33950.6 |
| cytochrome c family protein | SPO_RS00665 | P07625 | Positive | 137081 - 137494 | 14408.1 |
| isopentenyl-diphosphate delta-isomerase | SPO_RS00670 | Q5LWT6 | Positive | 137668 - 138210 | 20680.9 |
| response regulator | SPO_RS00675 | Q54YZ9 | Negative | 138223 - 140442 | 81536.5 |
| alpha-2-macroglobulin family protein | SPO_RS00680 | Q87E11 | Positive | 140689 - 146001 | 188438.0 |
| putative glycolipid-binding domain-containing protein | SPO_RS00685 | Not Available | Positive | 145998 - 146564 | 20757.4 |
| penicillin-binding protein 1c | SPO_RS00690 | P76577 | Positive | 146557 - 148593 | 72440.9 |
| membrane protein | SPO_RS00695 | Not Available | Negative | 148600 - 150645 | 73801.9 |
| duf4159 domain-containing protein | SPO_RS00700 | Not Available | Negative | 150642 - 153404 | 97880.8 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
