Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c-550 pedfSPO_RS07710Q9I2C5Positive1590778 - 159145223218.1
abc transporter substrate-binding proteinSPO_RS07715Not AvailablePositive1591455 - 159236332522.7
coxg family proteinSPO_RS07720Not AvailablePositive1592480 - 159300418157.6
(2fe-2s)-binding proteinSPO_RS07725P19921Positive1593041 - 159352616719.9
xanthine dehydrogenase family protein molybdopterin-binding subunitSPO_RS07730Not AvailablePositive1593623 - 159598983773.1
xanthine dehydrogenase family protein subunit mSPO_RS07735P19920Positive1596089 - 159687126634.5
4fe-4s binding proteinSPO_RS07740Q00790Negative1596962 - 159903174827.9
pqq-dependent catabolism-associated cxxcw motif proteinSPO_RS07745Not AvailablePositive1599213 - 159980021360.9
quinoprotein relay system zinc metallohydrolase 1SPO_RS07750Not AvailableNegative1599808 - 160076433767.4
quinoprotein dehydrogenase-associated soxyz-like carrierSPO_RS07755Not AvailableNegative1600764 - 160154627791.8

Displaying genes 1581 – 1590 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.