Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | SPO_RS07615 | Q58206 | Positive | 1569267 - 1569974 | 25522.5 |
| abc transporter permease | SPO_RS07620 | Not Available | Positive | 1569982 - 1572345 | 84436.9 |
| efflux rnd transporter periplasmic adaptor subunit | SPO_RS07625 | Not Available | Positive | 1572342 - 1573592 | 45193.0 |
| fumarate hydratase | SPO_RS07630 | P40720 | Negative | 1573628 - 1575136 | 53109.6 |
| alpha/beta fold hydrolase | SPO_RS07635 | Not Available | Positive | 1575372 - 1576265 | 32749.4 |
| pyrroloquinoline quinone biosynthesis protein pqqe | SPO_RS07640 | Q5LTB4 | Negative | 1576262 - 1577356 | 39207.9 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | SPO_RS07645 | Q5LTB3 | Negative | 1577451 - 1577738 | 10299.6 |
| pyrroloquinoline-quinone synthase pqqc | SPO_RS07650 | Q5LTB2 | Negative | 1577735 - 1578460 | 27176.1 |
| pyrroloquinoline quinone biosynthesis protein pqqb | SPO_RS07655 | Q5LTB1 | Negative | 1578457 - 1579344 | 31571.7 |
| pyrroloquinoline quinone precursor peptide pqqa | SPO_RS22465 | Q5LTB0 | Negative | 1579372 - 1579479 | 3837.59 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
