Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinSPO_RS07615Q58206Positive1569267 - 156997425522.5
abc transporter permeaseSPO_RS07620Not AvailablePositive1569982 - 157234584436.9
efflux rnd transporter periplasmic adaptor subunitSPO_RS07625Not AvailablePositive1572342 - 157359245193.0
fumarate hydrataseSPO_RS07630P40720Negative1573628 - 157513653109.6
alpha/beta fold hydrolaseSPO_RS07635Not AvailablePositive1575372 - 157626532749.4
pyrroloquinoline quinone biosynthesis protein pqqeSPO_RS07640Q5LTB4Negative1576262 - 157735639207.9
pyrroloquinoline quinone biosynthesis peptide chaperone pqqdSPO_RS07645Q5LTB3Negative1577451 - 157773810299.6
pyrroloquinoline-quinone synthase pqqcSPO_RS07650Q5LTB2Negative1577735 - 157846027176.1
pyrroloquinoline quinone biosynthesis protein pqqbSPO_RS07655Q5LTB1Negative1578457 - 157934431571.7
pyrroloquinoline quinone precursor peptide pqqaSPO_RS22465Q5LTB0Negative1579372 - 15794793837.59

Displaying genes 1561 – 1570 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.