Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | SPO_RS07415 | Not Available | Positive | 1526570 - 1527064 | 18133.0 |
| trap transporter large permease | SPO_RS07420 | Not Available | Positive | 1527061 - 1528374 | 46171.4 |
| thioesterase family protein | SPO_RS07425 | Not Available | Negative | 1528377 - 1528808 | 16208.0 |
| marr family winged helix-turn-helix transcriptional regulator | SPO_RS07430 | Not Available | Positive | 1528987 - 1529466 | 17806.5 |
| indolepyruvate ferredoxin oxidoreductase subunit alpha | SPO_RS07435 | Not Available | Positive | 1529474 - 1531621 | 77002.2 |
| indolepyruvate oxidoreductase subunit beta family protein | SPO_RS07440 | Not Available | Positive | 1531618 - 1533171 | 55068.1 |
| aspartate/glutamate racemase family protein | SPO_RS07445 | Not Available | Positive | 1533272 - 1534045 | 28577.5 |
| ompa family protein | SPO_RS22160 | P37726 | Positive | 1534121 - 1535335 | 41955.9 |
| trap transporter large permease subunit | SPO_RS07455 | O07838 | Negative | 1535348 - 1536685 | 47172.3 |
| trap transporter small permease | SPO_RS07460 | Not Available | Negative | 1536713 - 1537216 | 18674.5 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
