Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-keto-5-aminohexanoate cleavage protein | SPO_RS07315 | Not Available | Positive | 1507162 - 1508079 | 32763.6 |
| carnitine 3-dehydrogenase | SPO_RS07320 | Q5LTH8 | Positive | 1508172 - 1509635 | 53508.2 |
| sdr family nad(p)-dependent oxidoreductase | SPO_RS07325 | O86034 | Positive | 1509632 - 1510393 | 26037.2 |
| hypothetical protein | SPO_RS07330 | Not Available | Negative | 1510500 - 1510682 | 6714.75 |
| helix-turn-helix domain-containing protein | SPO_RS07335 | Not Available | Negative | 1510770 - 1511633 | 32501.0 |
| duf2061 domain-containing protein | SPO_RS07340 | Not Available | Positive | 1511738 - 1511941 | 7215.99 |
| fatty acid desaturase | SPO_RS07345 | Not Available | Positive | 1511934 - 1512836 | 34087.6 |
| eama family transporter | SPO_RS07350 | Not Available | Positive | 1512857 - 1513759 | 31890.7 |
| dead/deah box helicase | SPO_RS07355 | Not Available | Negative | 1513974 - 1515389 | 52390.0 |
| glycosyltransferase family 2 protein | SPO_RS07360 | Not Available | Negative | 1515580 - 1516512 | 35186.1 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
