Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosinase family protein | SPO_RS07170 | P33180 | Positive | 1475740 - 1477203 | 51216.4 |
| duf2182 domain-containing protein | SPO_RS22155 | Not Available | Positive | 1477200 - 1478066 | 29947.9 |
| duf6476 family protein | SPO_RS07180 | Not Available | Negative | 1478179 - 1478481 | 10977.5 |
| rlua family pseudouridine synthase | SPO_RS07185 | P50513 | Positive | 1478480 - 1479508 | 36406.7 |
| rna polymerase sigma factor rpoh | SPO_RS07190 | Not Available | Positive | 1479659 - 1480555 | 34052.7 |
| dipeptidase | SPO_RS07195 | C5FK77 | Negative | 1480688 - 1481866 | 42406.8 |
| dksa/trar family c4-type zinc finger protein | SPO_RS07200 | P41039 | Positive | 1482006 - 1482275 | 9724.46 |
| dna modification methyltransferase | SPO_RS07205 | Not Available | Positive | 1482322 - 1482504 | 6957.35 |
| hypothetical protein | SPO_RS22825 | Not Available | Negative | 1482529 - 1483194 | 24428.4 |
| m3 family oligoendopeptidase | SPO_RS07210 | Not Available | Negative | 1483568 - 1485388 | 68316.2 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
