Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster-binding protein | SPO_RS06870 | P80306 | Negative | 1408872 - 1409195 | 11792.0 |
| peptidoglycan-binding protein | SPO_RS06875 | Not Available | Positive | 1409381 - 1409908 | 18878.5 |
| o-succinylhomoserine sulfhydrylase | SPO_RS06880 | P9WGB4 | Positive | 1410220 - 1411410 | 42196.3 |
| gtp cyclohydrolase fole2 | SPO_RS06885 | Q5LTR1 | Positive | 1411588 - 1412691 | 40862.1 |
| hypothetical protein | SPO_RS06890 | Not Available | Positive | 1412869 - 1413420 | 18199.9 |
| trkh family potassium uptake protein | SPO_RS06895 | E1V6K4 | Positive | 1413473 - 1414921 | 51518.1 |
| serine protease | SPO_RS06900 | Not Available | Negative | 1415022 - 1416773 | 61660.3 |
| glycine--trna ligase subunit alpha | SPO_RS06905 | A1AZF6 | Positive | 1416985 - 1417920 | 34756.0 |
| fkbm family methyltransferase | SPO_RS06910 | Not Available | Positive | 1417946 - 1418632 | 25168.0 |
| duf6446 family protein | SPO_RS06915 | Not Available | Positive | 1418665 - 1419189 | 18626.1 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
