Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SPO_RS00500 | P94312 | Negative | 101354 - 102169 | 28603.7 |
| abc transporter permease | SPO_RS00505 | Not Available | Negative | 102166 - 103113 | 34142.7 |
| abc transporter substrate-binding protein | SPO_RS00510 | Q5PGP4 | Negative | 103222 - 104709 | 53421.0 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SPO_RS00515 | Q5LWP5 | Positive | 104880 - 105719 | 29172.5 |
| pantoate--beta-alanine ligase | SPO_RS00520 | Q5LWR2 | Positive | 105716 - 106573 | 30412.5 |
| glycerol kinase glpk | SPO_RS00525 | Q5LWR1 | Positive | 106644 - 108122 | 53039.1 |
| flavin-dependent oxidoreductase | SPO_RS00530 | A0A172J1S0 | Negative | 108119 - 109378 | 45348.2 |
| peroxide stress protein yaaa | SPO_RS00535 | Q5LWQ9 | Negative | 109440 - 110210 | 28431.8 |
| dna helicase recq | SPO_RS00540 | P15043 | Negative | 110244 - 112283 | 74516.6 |
| abc transporter permease | SPO_RS00545 | P0AGH1 | Negative | 113139 - 114266 | 40797.6 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
