Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | SPO_RS05985 | B8H0A0 | Positive | 1232653 - 1234440 | 63824.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | SPO_RS05990 | Q89FU2 | Positive | 1234459 - 1235940 | 51838.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SPO_RS05995 | P11880 | Positive | 1235937 - 1237331 | 47977.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | SPO_RS06000 | Q5LU74 | Positive | 1237347 - 1238429 | 38862.4 |
| hypothetical protein | SPO_RS06005 | Not Available | Positive | 1238572 - 1239372 | 29546.2 |
| tetratricopeptide repeat protein | SPO_RS06010 | Not Available | Positive | 1239365 - 1240468 | 41263.4 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | SPO_RS06015 | Q5LU71 | Positive | 1240535 - 1241935 | 49021.2 |
| nad(p)/fad-dependent oxidoreductase | SPO_RS06020 | P37631 | Negative | 1242071 - 1243255 | 42837.1 |
| dmt family transporter | SPO_RS06025 | Not Available | Negative | 1243311 - 1244195 | 30629.2 |
| helix-turn-helix domain-containing protein | SPO_RS06030 | Not Available | Negative | 1244295 - 1244657 | 13220.2 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
