Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate carboxylase | SPO_RS05935 | Q9KWU4 | Negative | 1218330 - 1221767 | 126265.0 |
| alpha-hydroxy acid oxidase | SPO_RS05940 | Q6DAY3 | Negative | 1221905 - 1223050 | 41658.5 |
| diguanylate cyclase | SPO_RS05945 | Q9A5I5 | Negative | 1223160 - 1224956 | 66908.3 |
| atp-dependent helicase | SPO_RS05950 | Q4ULN5 | Positive | 1225147 - 1227543 | 88558.6 |
| eama family transporter | SPO_RS05955 | Not Available | Negative | 1227562 - 1228425 | 30609.2 |
| phosphodiesterase | SPO_RS05960 | Not Available | Negative | 1228426 - 1229202 | 29107.3 |
| duf1127 domain-containing protein | SPO_RS05965 | Not Available | Negative | 1229630 - 1229854 | 8180.92 |
| division/cell wall cluster transcriptional repressor mraz | SPO_RS05970 | Q5LU80 | Positive | 1230788 - 1231291 | 18886.2 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | SPO_RS05975 | Q5LU79 | Positive | 1231296 - 1232291 | 35635.6 |
| cell division protein ftsl | SPO_RS05980 | Not Available | Positive | 1232288 - 1232656 | 13959.8 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
