Ruegeria pomeroyi DSS-3

Gram-negativeBacilliMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Ruegeria

Description

Ruegeria pomeroyi DSS-3 is a Gram-negative, aerobic bacterium characterized by its bacilli shape and mobility. It is a heterotrophic organism that thrives in aquatic environments. The strain DSS-3 is mesophilic, indicating it prefers moderate temperature ranges for growth. This bacterium is notable for being free-living, which means it does not rely on a host organism for survival. With a single replicon, Ruegeria pomeroyi DSS-3 can efficiently manage its genetic information, contributing to its adaptability in various aquatic habitats. The strain is cataloged under the accession number NC_003911.12. The ecological relevance of Ruegeria pomeroyi DSS-3 lies in its role in marine ecosystems. As a heterotroph, it contributes to the cycling of organic matter in aquatic environments, potentially influencing nutrient dynamics and the overall health of marine ecosystems. Its mobility may also play a significant role in its ability to colonize different niches within these habitats, further enhancing its ecological impact.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRuegeria
SpeciesRuegeria pomeroyi
StrainDSS-3

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Ruegeria pomeroyi DSS-3, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinSPO_RS05740Not AvailablePositive1185598 - 118654833850.0
glycine betaine/l-proline abc transporter atp-binding proteinSPO_RS05745Not AvailablePositive1186558 - 118761037876.7
proline/glycine betaine abc transporter permeaseSPO_RS05750Not AvailablePositive1187607 - 118967072659.1
nnru family proteinSPO_RS05755Not AvailablePositive1189758 - 119042323424.9
duf2478 domain-containing proteinSPO_RS05760Q89EW7Positive1190485 - 119100618545.3
aspartate aminotransferase family proteinSPO_RS05765Not AvailableNegative1191288 - 119266149540.9
nad-dependent succinate-semialdehyde dehydrogenaseSPO_RS05770E1V7V8Negative1192816 - 119429152821.8
lrp/asnc family transcriptional regulatorSPO_RS05775E1V7V9Negative1194419 - 119489817725.6
n(2)-acetyl-l-2,4-diaminobutanoate deacetylase doebSPO_RS05780E1V7W0Negative1194910 - 119590235125.1
ectoine hydrolase doeaSPO_RS05785E1V7W1Negative1195906 - 119709344517.2

Displaying genes 1181 – 1190 of 4001 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.