Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria pomeroyi |
| Strain | DSS-3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruegeria pomeroyi DSS-3, complete sequence.
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
Not Available
Non-Coding Genes
Not Available
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydro-lyase | SPO_RS05640 | Q5LUE3 | Positive | 1166293 - 1167120 | 29934.8 |
| trap transporter substrate-binding protein | SPO_RS05645 | Not Available | Positive | 1167142 - 1168179 | 36052.5 |
| trap transporter small permease subunit | SPO_RS05650 | Not Available | Positive | 1168218 - 1168751 | 19130.8 |
| trap transporter large permease | SPO_RS05655 | Q9HU16 | Positive | 1168748 - 1170034 | 44605.9 |
| duf2848 domain-containing protein | SPO_RS05660 | Not Available | Positive | 1170038 - 1170691 | 23368.2 |
| peptidoglycan-binding protein | SPO_RS05665 | Not Available | Negative | 1170849 - 1172774 | 69262.8 |
| ppx/gppa family phosphatase | SPO_RS05670 | B2VG72 | Negative | 1173335 - 1174879 | 57707.0 |
| hypothetical protein | SPO_RS05675 | Not Available | Negative | 1174941 - 1175618 | 23734.7 |
| ai-2e family transporter | SPO_RS05680 | Q9ZCT3 | Negative | 1175619 - 1176686 | 37834.7 |
| helix-turn-helix transcriptional regulator | SPO_RS05685 | Not Available | Positive | 1176878 - 1177681 | 29301.7 |
Pathways
1183 pathways
Health Effects
No health effects information available for this bacterium.
